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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
total RNA-seq
small RNA-seq
12
WGBS
11
RRBS
8
Hi-C
6
ATAC-seq
3
single cell RNA-seq
Assay category
42
Transcription
23
DNA methylation
8
3D chromatin structure
6
DNA accessibility
Target of assay
3
control
Date released
707
February, 2021
399
May, 2021
369
August, 2017
341
May, 2020
215
October, 2019
205
February, 2023
200
May, 2022
189
August, 2021
168
July, 2018
94
November, 2017
79
July, 2019
62
March, 2020
61
November, 2019
59
September, 2018
59
September, 2020
49
April, 2018
44
December, 2017
40
May, 2024
39
February, 2018
31
October, 2018
25
February, 2020
22
May, 2019
19
April, 2020
17
October, 2017
16
January, 2021
15
November, 2018
15
November, 2020
11
April, 2019
9
January, 2019
8
January, 2018
7
August, 2020
7
December, 2019
7
June, 2019
6
September, 2017
5
December, 2018
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
1
May, 2023
Available data
61
bigWig
58
bam
42
tsv
19
bed bedMethyl
19
bigBed bedMethyl
6
bed narrowPeak
4
bed bed3+
4
hdf5
bigBed narrowPeak
Organism
79
Homo sapiens
Biosample type
57
tissue
22
primary cell
Organ
24
heart
15
connective tissue
13
brain
13
epithelium
12
vasculature
11
blood vessel
9
adipose tissue
kidney
8
musculature of body
7
liver
5
limb
4
pancreas
3
artery
2
pericardium
1
eye
Project
79
AMP
Genome assembly (visualization)
62
hg19
56
GRCh38
Lab
79
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
small RNA-seq
organ_slims!
kidney
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
79 results
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Clear Filters
total RNA-seq
WGBS
RRBS
Hi-C
ATAC-seq
single cell RNA-seq
tissue
heart left ventricle
2
4
1
2
gastrocnemius medialis
4
omental fat pad
4
subcutaneous adipose tissue
4
heart
2
1
+ See 23 more…
primary cell
cerebellar granule cell
2
Purkinje cell
1
astrocyte of the cerebellum
1
brain microvascular endothelial cell
1
brain pericyte
1
+ See 16 more…
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