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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
19
ChIP-seq
2
total RNA-seq
Assay category
19
DNA binding
2
Transcription
Target of assay
15
histone
15
histone modification
8
narrow histone mark
7
broad histone mark
4
control
transcription factor
2
RNA binding protein
1
chromatin remodeller
Date released
17
December, 2017
4
May, 2021
Available data
21
bam
17
bigWig
17
fastq
15
bed narrowPeak
12
bigBed narrowPeak
2
tagAlign
2
tsv
Organism
21
Homo sapiens
Biosample type
401
primary cell
78
cell line
21
in vitro differentiated cells
15
tissue
Organ
75
connective tissue
26
embryo
21
epithelium
13
liver
2
pancreas
1
adipose tissue
1
heart
Project
21
AMP
Genome assembly (visualization)
17
GRCh38
17
hg19
Lab
21
AMP-T2D consortium
Audit category:
5
inconsistent ontology term
Audit category:
1
inconsistent control read length
assay_title!
small RNA-seq
target.investigated_as!
transcription factor
BIOSAMPLE
ASSAY
21 results
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ChIP-seq
total RNA-seq
in vitro differentiated cells
hepatocyte
13
Hepatic endoderm
4
pancreatic PP cell
2
endothelial cell
1
intermediate endothelial cell
1
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