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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
ChIP-seq
8
ATAC-seq
7
total RNA-seq
4
Hi-C
1
WGBS
Assay category
8
DNA accessibility
7
Transcription
4
3D chromatin structure
1
DNA methylation
Date released
6
February, 2021
6
October, 2019
5
July, 2019
3
February, 2020
Available data
49
bam
44
bed narrowPeak
43
bigWig
36
bed bed3+
36
bed broadPeak
36
bigBed broadPeak
bigBed narrowPeak
7
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
20
Homo sapiens
Biosample type
20
tissue
Organ
685
pancreas
518
connective tissue
414
adipose tissue
355
epithelium
233
liver
229
heart
216
kidney
159
bone element
122
vasculature
121
blood vessel
103
artery
52
eye
35
brain
23
musculature of body
20
limb
16
skeleton
15
embryo
10
lung
6
nerve
4
spleen
2
intestine
2
pericardium
2
thymus
2
vein
1
adrenal gland
1
blood
1
bodily fluid
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pituitary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
20
AMP
Genome assembly (visualization)
13
GRCh38
12
hg19
Lab
20
AMP-T2D consortium
assay_title!
snATAC-seq
ChIP-seq
files.file_type!
bigBed narrowPeak
BIOSAMPLE
ASSAY
20 results
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ATAC-seq
total RNA-seq
Hi-C
WGBS
tissue
tibial nerve
1
5
gastrocnemius medialis
1
4
tibial artery
1
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
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