Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
27
ATAC-seq
5
total RNA-seq
DNase-seq
3
ChIP-seq
1
RRBS
Assay category
27
DNA accessibility
5
Transcription
3
DNA binding
1
DNA methylation
Target of assay
1
RNA binding protein
1
control
1
histone
1
histone modification
1
narrow histone mark
1
transcription factor
Date released
31
February, 2023
October, 2019
3
June, 2019
1
February, 2020
1
July, 2019
Available data
29
bed narrowPeak
5
tsv
3
bam
2
bigBed narrowPeak
2
bigWig
1
bed bedMethyl
1
bigBed bedMethyl
Organism
36
Homo sapiens
Biosample type
32
tissue
4
primary cell
Organ
910
pancreas
778
liver
671
connective tissue
488
adipose tissue
475
epithelium
355
heart
240
kidney
182
vasculature
178
blood vessel
168
brain
159
bone element
113
artery
62
musculature of body
61
blood
61
bodily fluid
37
embryo
36
eye
24
spleen
21
limb
16
skeleton
10
lung
2
intestine
2
pericardium
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
nerve
1
ovary
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
1
vein
Project
36
AMP
Genome assembly (visualization)
30
hg19
2
GRCh38
Lab
36
AMP-T2D consortium
assay_title!
snATAC-seq
DNase-seq
month_released!
October, 2019
BIOSAMPLE
ASSAY
36 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
total RNA-seq
ChIP-seq
RRBS
tissue
retina
15
3
pigmented layer of retina
12
2
primary cell
retinal pigment epithelial cell
3
1
Download