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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
ChIP-seq
33
DNase-seq
6
Hi-C
6
total RNA-seq
5
RRBS
2
small RNA-seq
1
ATAC-seq
1
WGBS
1
pCHi-C
1
single cell RNA-seq
snATAC-seq
Assay category
33
DNA accessibility
6
3D chromatin structure
Date released
33
June, 2019
4
July, 2019
2
March, 2020
Available data
33
bam
33
bed bed3+
33
bed broadPeak
33
bed narrowPeak
33
bigBed broadPeak
33
bigBed narrowPeak
33
bigWig
2
bedpe bed3+
2
hic
Organism
39
Homo sapiens
Biosample type
38
tissue
1
primary cell
Organ
82
kidney
40
limb
39
musculature of body
35
brain
33
heart
27
epithelium
18
ureter
17
pancreas
16
vasculature
14
blood vessel
10
connective tissue
10
liver
4
artery
4
eye
4
vein
2
adipose tissue
2
nerve
1
spleen
Project
39
AMP
Genome assembly (visualization)
35
hg19
33
GRCh38
Lab
39
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
snATAC-seq
BIOSAMPLE
ASSAY
39 results
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DNase-seq
Hi-C
tissue
muscle of arm
17
muscle of leg
13
gastrocnemius medialis
4
psoas muscle
2
forelimb muscle
1
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primary cell
skeletal muscle cell
1
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