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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
total RNA-seq
8
ATAC-seq
1
pCHi-C
Assay category
58
Transcription
8
DNA accessibility
Date released
66
February, 2021
1
May, 2021
Available data
txt
66
bam
58
bigWig
58
tsv
8
bed narrowPeak
bed bed3
Organism
67
Homo sapiens
Biosample type
66
tissue
1
primary cell
Organ
929
pancreas
790
liver
678
connective tissue
524
epithelium
491
adipose tissue
393
heart
286
kidney
285
brain
236
vasculature
230
blood vessel
141
artery
122
limb
95
musculature of body
67
bone element
61
blood
61
bodily fluid
61
eye
43
nerve
37
embryo
25
spleen
22
vein
18
ureter
10
lung
8
skeleton
5
gonad
5
ovary
2
intestine
2
pericardium
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
skin of body
1
small intestine
1
spinal cord
1
stomach
1
urinary bladder
Project
66
AMP
1
T1D
Genome assembly (visualization)
66
GRCh38
66
hg19
Lab
66
AMP-T2D consortium
1
Kyle Gaulton, UCSD
assay_title!
snATAC-seq
files.file_type!
bed bed3
txt
BIOSAMPLE
ASSAY
67 results
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total RNA-seq
ATAC-seq
pCHi-C
tissue
bone tissue
58
distal epiphysis
1
distal epiphysis of femur
1
distal epiphysis of humerus
1
distal epiphysis of tibia
1
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primary cell
megakaryocyte
1
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