Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
2
Capture-C
2
total RNA-seq
1
whole genome sequencing assay
Assay category
2
Transcription
1
DNA sequencing
Date released
3
August, 2021
2
May, 2021
Available data
310
bigWig
274
bed narrowPeak
205
bam
168
fastq
132
zippedFastqFolder
112
tsv
84
tagAlign
66
txt
64
xls
7
hic
5
bedpe bed3+
4
bed bed3+
3
bed bedgraph
3
cool
2
bed broadPeak
1
bedpe
1
vcf
Organism
5
Homo sapiens
Biosample type
2
in vitro differentiated cells
2
primary cell
1
cell line
Organ
2
connective tissue
1
liver
Project
5
AMP
Genome assembly (visualization)
4
hg19
Lab
AMP-T2D consortium
2
Kyle Gaulton, UCSD
2
Struan F.A. Grant, CHOP
1
Bing Ren, UCSD
assay_title!
snATAC-seq
lab.title!
AMP-T2D consortium
BIOSAMPLE
ASSAY
5 results
search-icon
table-tab-icon
Clear Filters
Capture-C
total RNA-seq
whole genome sequencing assay
in vitro differentiated cells
adipocyte
1
osteoblast
1
primary cell
CD8-positive, alpha-beta T cell
2
cell line
HepG2
1
Download