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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
5
single cell RNA-seq
3
snDrop-seq
2
RNA microarray
2
pCHi-C
1
small RNA-seq
Assay category
6
Transcription
Date released
8
February, 2021
2
December, 2019
2
March, 2020
1
July, 2019
Available data
183
bed narrowPeak
133
bam
120
bigWig
104
bigBed narrowPeak
78
bed bed3+
78
bed broadPeak
78
bigBed broadPeak
64
xls
13
tsv
13
txt
5
csv
4
bed bedMethyl
4
bigBed bedMethyl
1
hic
Organism
13
Homo sapiens
Biosample type
11
tissue
2
cell line
Organ
96
heart
91
pancreas
78
epithelium
13
kidney
9
brain
9
connective tissue
7
blood vessel
7
vasculature
5
liver
4
adipose tissue
3
musculature of body
2
artery
2
intestine
1
adrenal gland
1
esophagus
1
gonad
1
large intestine
1
lung
1
mammary gland
1
ovary
1
small intestine
1
spleen
1
stomach
1
thymus
1
urinary bladder
Project
13
AMP
Genome assembly (visualization)
1
GRCh38
1
hg19
Lab
13
AMP-T2D consortium
Audit category:
7
audit script error
2
inconsistent ontology term
assay_title!
snATAC-seq
total RNA-seq
BIOSAMPLE
ASSAY
13 results
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Clear Filters
single cell RNA-seq
snDrop-seq
RNA microarray
pCHi-C
small RNA-seq
tissue
kidney
5
kidney (Cortex-Medulla)
1
kidney (cortex)
1
kidney (medulla)
1
kidney interstitium
1
+ See 2 more…
cell line
RCC 7860 VHL
1
RCC 7860 vector
1
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