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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
total RNA-seq
16
small RNA-seq
12
WGBS
6
ATAC-seq
6
ChIP-seq
6
RRBS
4
Hi-C
2
FAIRE-seq
Assay category
47
Transcription
18
DNA methylation
8
DNA accessibility
6
DNA binding
4
3D chromatin structure
Target of assay
6
control
Date released
667
February, 2021
397
November, 2017
352
August, 2017
309
August, 2021
280
October, 2019
194
May, 2020
193
May, 2021
163
June, 2019
120
July, 2018
115
February, 2023
115
May, 2019
94
December, 2017
87
November, 2018
80
April, 2019
77
July, 2019
74
October, 2018
65
May, 2022
63
March, 2020
61
November, 2019
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
15
May, 2023
10
November, 2020
9
April, 2020
8
January, 2018
6
April, 2018
6
September, 2017
5
December, 2019
5
March, 2019
4
March, 2023
1
August, 2018
1
October, 2022
Available data
70
bam
63
bigWig
47
tsv
14
bed bedMethyl
14
bigBed bedMethyl
7
bed narrowPeak
6
fastq
2
bed bed3+
2
bigBed narrowPeak
Organism
83
Homo sapiens
Biosample type
83
tissue
primary cell
Organ
20
heart
12
pancreas
11
brain
10
adipose tissue
10
connective tissue
8
liver
7
blood vessel
7
musculature of body
7
vasculature
5
limb
4
kidney
1
artery
1
pericardium
Project
83
AMP
Genome assembly (visualization)
63
GRCh38
62
hg19
Lab
83
AMP-T2D consortium
assay_title!
snATAC-seq
biosample_type!
primary cell
BIOSAMPLE
ASSAY
83 results
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total RNA-seq
small RNA-seq
WGBS
ATAC-seq
ChIP-seq
RRBS
Hi-C
FAIRE-seq
tissue
heart left ventricle
2
4
2
1
islet of Langerhans
6
1
omental fat pad
4
1
right lobe of liver
2
2
1
subcutaneous adipose tissue
4
1
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