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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
81
total RNA-seq
11
ATAC-seq
3
CRISPR genome editing followed by DNA sequencing
2
HiChIP
snATAC-seq
Assay category
81
Transcription
11
DNA accessibility
Date released
153
May, 2021
113
May, 2022
97
February, 2023
59
September, 2020
47
September, 2023
45
May, 2020
18
February, 2021
9
April, 2020
7
August, 2020
7
March, 2020
5
March, 2023
3
October, 2022
Available data
76
fastq
Organism
97
Homo sapiens
Biosample type
76
primary cell
16
tissue
5
cell line
Organ
53
pancreas
37
epithelium
Project
AMP
76
HPAP
21
T1D
Lab
76
Klaus Kaestner, Upenn
21
Kyle Gaulton, UCSD
assay_title!
snATAC-seq
organ_slims!
urinary bladder
award.project!
AMP
BIOSAMPLE
ASSAY
97 results
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total RNA-seq
ATAC-seq
CRISPR genome editing followed by DNA sequencing
HiChIP
primary cell
exocrine cell
39
pancreatic alpha cell
27
pancreatic beta cell
10
tissue
islet of Langerhans
5
11
cell line
EndoC_BH1
3
2
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