Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
42
total RNA-seq
16
ATAC-seq
4
ChIP-seq
1
pCHi-C
Assay category
42
Transcription
16
DNA accessibility
4
DNA binding
Target of assay
2
histone
2
histone modification
2
narrow histone mark
1
control
1
transcription factor
Date released
487
February, 2021
313
August, 2017
157
July, 2018
104
May, 2022
76
October, 2018
72
September, 2018
68
February, 2023
63
May, 2021
56
November, 2019
39
April, 2018
24
July, 2019
22
June, 2019
22
October, 2019
19
September, 2020
16
March, 2020
16
November, 2020
11
September, 2017
9
August, 2021
8
November, 2018
7
August, 2020
6
October, 2017
5
March, 2019
4
August, 2018
3
February, 2020
3
October, 2022
2
May, 2019
1
January, 2018
1
June, 2018
1
May, 2023
Available data
45
bam
44
bigWig
41
tsv
3
bed narrowPeak
3
tagAlign
Organism
63
Homo sapiens
Biosample type
37
tissue
21
cell line
4
in vitro differentiated cells
1
primary cell
Organ
61
pancreas
26
epithelium
3
heart
2
connective tissue
2
embryo
1
bone element
1
bone marrow
1
thymus
Project
61
AMP
2
T1D
Genome assembly (visualization)
44
GRCh38
44
hg19
Lab
61
AMP-T2D consortium
2
Kyle Gaulton, UCSD
Audit category:
21
inconsistent ontology term
assay_title!
snATAC-seq
BIOSAMPLE
ASSAY
63 results
search-icon
table-tab-icon
Clear Filters
total RNA-seq
ATAC-seq
ChIP-seq
pCHi-C
tissue
islet of Langerhans
36
pancreas
1
cell line
EndoC_BH1
4
16
1
in vitro differentiated cells
pancreatic PP cell
3
cardiac fibroblast
1
primary cell
adult endothelial progenitor cell
1
Download