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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
89
total RNA-seq
28
ChIP-seq
3
ATAC-seq
1
DNase-seq
1
FAIRE-seq
Assay category
89
Transcription
28
DNA binding
5
DNA accessibility
Target of assay
histone
66
histone modification
34
narrow histone mark
32
broad histone mark
21
control
7
transcription factor
2
RNA binding protein
Date released
157
July, 2018
122
August, 2017
104
May, 2022
59
May, 2021
54
February, 2023
45
November, 2019
40
September, 2018
39
April, 2018
32
February, 2021
23
October, 2018
19
September, 2020
11
March, 2020
11
October, 2019
11
September, 2017
10
November, 2020
7
August, 2020
7
November, 2018
6
July, 2019
5
March, 2019
5
October, 2017
4
August, 2021
4
June, 2019
3
August, 2018
3
October, 2022
1
February, 2020
1
June, 2018
1
May, 2019
Available data
116
bam
116
fastq
101
bigWig
89
tsv
7
bed bed3+
6
bed narrowPeak
5
bigBed narrowPeak
2
tagAlign
Organism
121
Homo sapiens
Biosample type
107
tissue
15
primary cell
Organ
122
pancreas
56
connective tissue
25
adipose tissue
22
liver
15
epithelium
7
musculature of body
Project
122
AMP
Genome assembly (visualization)
101
hg19
100
GRCh38
Lab
122
AMP-T2D consortium
Audit category:
6
missing controlled_by
assay_title!
snATAC-seq
target.investigated_as!
histone
BIOSAMPLE
ASSAY
122 results
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Clear Filters
total RNA-seq
ChIP-seq
ATAC-seq
DNase-seq
FAIRE-seq
tissue
islet of Langerhans
89
14
1
1
pancreas
2
primary cell
pancreatic alpha cell
6
1
pancreatic beta cell
6
1
pancreatic acinar cell
1
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