Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
99
ATAC-seq
97
ChIP-seq
16
DNase-seq
Assay category
115
DNA accessibility
97
DNA binding
Target of assay
88
histone
88
histone modification
57
broad histone mark
31
narrow histone mark
9
transcription factor
6
RNA binding protein
3
recombinant protein
Date released
65
August, 2021
54
November, 2017
40
May, 2024
35
February, 2023
16
June, 2019
2
November, 2018
Available data
359
bam
212
bed narrowPeak
177
tsv
167
fastq
159
tagAlign
157
txt
136
bigWig
72
bigBed narrowPeak
64
xls
17
bed bedMethyl
17
bed broadPeak
17
bigBed bedMethyl
16
bed bed3+
16
bigBed broadPeak
6
csv
2
bedpe bed3+
1
vcf
Organism
212
Homo sapiens
Biosample type
207
tissue
primary cell
4
cell line
1
in vitro differentiated cells
Organ
77
heart
65
kidney
62
brain
35
artery
35
blood vessel
35
vasculature
4
liver
2
pancreas
Project
212
AMP
Genome assembly (visualization)
1371
GRCh38
hg19
Lab
108
AMP-T2D consortium
64
Katalin Susztak, Upenn
40
Patrick T. Ellinor, Broad
assay_title!
snDrop-seq
biosample_type!
primary cell
assembly!
hg19
BIOSAMPLE
ASSAY
212 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
ChIP-seq
DNase-seq
tissue
kidney
64
left cardiac atrium
40
coronary artery
35
layer of hippocampus
16
caudate nucleus
11
1
+ See 17 more…
cell line
HepG2
4
in vitro differentiated cells
neural progenitor cell
1
See all biosamples
Download