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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
163
DNase-seq
4
ATAC-seq
1
Hi-C
Assay category
167
DNA accessibility
1
3D chromatin structure
Date released
664
February, 2021
397
November, 2017
352
August, 2017
315
August, 2021
280
October, 2019
194
May, 2020
193
May, 2021
163
June, 2019
120
July, 2018
117
February, 2023
115
May, 2019
94
December, 2017
87
November, 2018
80
April, 2019
77
July, 2019
74
October, 2018
66
May, 2022
63
March, 2020
61
November, 2019
47
September, 2023
40
May, 2024
39
February, 2018
35
December, 2018
30
January, 2019
25
February, 2020
23
October, 2017
19
April, 2020
15
May, 2023
10
November, 2020
8
January, 2018
8
January, 2021
6
April, 2018
6
September, 2017
5
December, 2019
5
March, 2019
4
March, 2023
1
August, 2018
1
August, 2022
1
October, 2022
Available data
164
bam
164
bed broadPeak
163
bed bed3+
163
bed narrowPeak
163
bigBed broadPeak
163
bigBed narrowPeak
163
bigWig
1
bedpe
1
fastq
1
hic
Organism
168
Homo sapiens
Biosample type
168
tissue
primary cell
Organ
68
kidney
32
limb
32
musculature of body
27
heart
25
brain
18
ureter
9
pancreas
3
blood vessel
3
eye
3
vasculature
2
artery
1
adipose tissue
1
connective tissue
Project
168
AMP
Genome assembly (visualization)
165
GRCh38
150
hg19
Lab
163
AMP-T2D consortium
2
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
Audit category:
1
inconsistent ontology term
assay_title!
snDrop-seq
biosample_type!
primary cell
BIOSAMPLE
ASSAY
168 results
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Clear Filters
DNase-seq
ATAC-seq
Hi-C
tissue
heart
18
muscle of arm
17
kidney
13
muscle of leg
13
brain
12
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