Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1343
ChIP-seq
1269
total RNA-seq
327
ATAC-seq
176
single cell RNA-seq
154
DNase-seq
87
RNA microarray
38
pCHi-C
28
WGBS
28
snATAC-seq
24
Hi-C
12
small RNA-seq
10
MeRIP-seq
10
RRBS
5
GRO-seq
5
STARR-seq
4
Capture-C
3
CRISPR genome editing followed by DNA sequencing
3
FAIRE-seq
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
1
whole genome sequencing assay
Assay category
28
DNA methylation
Date released
12
July, 2019
9
August, 2017
7
November, 2018
Available data
18
bam
17
bed bedMethyl
17
bigBed bedMethyl
17
bigWig
11
fastq
Organism
28
Homo sapiens
Biosample type
primary cell
27
tissue
1
cell line
Organ
8
heart
6
adipose tissue
6
connective tissue
5
liver
4
pancreas
2
blood vessel
2
spleen
2
vasculature
1
limb
1
musculature of body
Project
28
AMP
Genome assembly (visualization)
17
GRCh38
Lab
28
AMP-T2D consortium
assay_title!
snDrop-seq
biosample_type!
primary cell
organ_slims!
brain
BIOSAMPLE
ASSAY
28 results
search-icon
table-tab-icon
Clear Filters
WGBS
tissue
heart left ventricle
4
adipose tissue
3
liver
3
subcutaneous abdominal adipose tissue
3
aorta
2
+ See 8 more…
cell line
HepG2
1
See all biosamples
Download