Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
208
ATAC-seq
177
DNase-seq
4
FAIRE-seq
Assay category
595
DNA binding
389
DNA accessibility
Date released
163
June, 2019
64
August, 2021
63
February, 2023
38
May, 2022
20
November, 2019
10
November, 2018
8
February, 2021
7
July, 2019
6
October, 2017
6
October, 2019
4
August, 2017
Available data
389
bed narrowPeak
245
bam
224
bigWig
184
bigBed narrowPeak
178
bed broadPeak
177
bed bed3+
176
bigBed broadPeak
64
xls
41
fastq
5
bed bed3
1
tsv
1
txt
Organism
389
Homo sapiens
Biosample type
389
tissue
69
primary cell
22
in vitro differentiated cells
12
cell line
Organ
133
kidney
66
heart
50
pancreas
44
limb
43
blood vessel
43
vasculature
41
artery
32
musculature of body
30
eye
28
brain
24
liver
18
ureter
12
epithelium
8
bone element
8
skeleton
6
adipose tissue
6
connective tissue
3
nerve
2
spleen
Project
389
AMP
Genome assembly (visualization)
319
GRCh38
274
hg19
Lab
287
AMP-T2D consortium
64
Katalin Susztak, Upenn
20
Karen Mohlke, UNC
18
Kyle Gaulton, UCSD
Audit category:
2
inconsistent ontology term
assay_title!
snDrop-seq
BIOSAMPLE
ASSAY
389 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
DNase-seq
FAIRE-seq
tissue
kidney
64
13
1
islet of Langerhans
37
1
1
coronary artery
36
2
liver
20
2
heart
18
+ See 53 more…
See all biosamples
Download