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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
136
ChIP-seq
13
ATAC-seq
Assay category
136
DNA binding
13
DNA accessibility
Target of assay
132
histone
132
histone modification
72
broad histone mark
60
narrow histone mark
4
transcription factor
Date released
313
November, 2017
210
June, 2019
189
October, 2019
142
August, 2017
133
May, 2021
106
August, 2021
97
May, 2019
73
November, 2018
72
December, 2017
65
April, 2019
65
February, 2023
46
September, 2018
45
October, 2018
40
May, 2024
38
May, 2022
37
November, 2019
30
December, 2018
27
May, 2020
23
February, 2021
21
January, 2019
16
February, 2018
12
October, 2017
7
July, 2019
5
September, 2017
3
March, 2020
2
November, 2020
Available data
334
bigWig
316
bam
188
tsv
149
bed narrowPeak
90
tagAlign
39
fastq
2
bed bed3+
Organism
149
Homo sapiens
Biosample type
127
primary cell
21
in vitro differentiated cells
1
cell line
Organ
6
embryo
3
epithelium
3
pancreas
Project
85
T1D
64
AMP
Genome assembly (visualization)
149
hg19
119
GRCh38
Lab
114
Kyle Gaulton, UCSD
35
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
Audit category:
2
inconsistent control read length
assay_title!
snDrop-seq
BIOSAMPLE
ASSAY
149 results
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ChIP-seq
ATAC-seq
primary cell
monocyte
84
13
CD8-positive, alpha-beta T cell
30
in vitro differentiated cells
pancreatic endoderm
6
cardiomyocytes
3
definitive endodermal cell
2
embryonic stem cell
2
endocrine cell
2
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cell line
EndoC_BH1
1
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