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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
31
ATAC-seq
9
ChIP-seq
6
DNase-seq
Assay category
37
DNA accessibility
9
DNA binding
Target of assay
6
RNA binding protein
6
transcription factor
3
histone
3
histone modification
3
narrow histone mark
Date released
28
February, 2023
7
June, 2019
5
October, 2018
3
August, 2017
1
November, 2018
1
November, 2019
1
October, 2017
Available data
449
bam
431
bigWig
406
tsv
46
bed narrowPeak
44
fastq
16
bigBed narrowPeak
10
bed bed3+
8
tagAlign
7
bed broadPeak
6
bigBed broadPeak
3
bed bedMethyl
3
bigBed bedMethyl
1
bedpe bed3+
Organism
46
Homo sapiens
Biosample type
43
tissue
3
primary cell
Organ
441
liver
214
pancreas
203
brain
191
heart
183
kidney
151
epithelium
133
vasculature
129
blood vessel
92
limb
75
connective tissue
74
artery
60
musculature of body
54
blood
54
bodily fluid
33
eye
27
nerve
18
ureter
14
embryo
14
spleen
13
adipose tissue
13
vein
8
bone element
8
skeleton
1
pituitary gland
Project
46
AMP
Genome assembly (visualization)
46
hg19
17
GRCh38
Lab
46
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
snDrop-seq
BIOSAMPLE
ASSAY
46 results
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ATAC-seq
ChIP-seq
DNase-seq
tissue
retina
15
3
pigmented layer of retina
12
omental fat pad
1
3
2
subcutaneous adipose tissue
1
2
adipose tissue
1
1
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primary cell
retinal pigment epithelial cell
2
1
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