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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
161
ChIP-seq
18
ATAC-seq
17
pCHi-C
1
DNAme array
Assay category
161
DNA binding
Transcription
18
DNA accessibility
1
DNA methylation
Target of assay
138
histone
138
histone modification
76
broad histone mark
62
narrow histone mark
15
transcription factor
8
control
5
RNA binding protein
Date released
406
November, 2017
266
October, 2019
223
August, 2017
214
June, 2019
197
May, 2021
151
May, 2020
143
February, 2021
136
August, 2021
118
May, 2019
97
February, 2023
94
December, 2017
80
April, 2019
80
November, 2018
42
May, 2022
41
July, 2019
40
March, 2020
40
May, 2024
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2018
18
October, 2017
11
May, 2023
10
April, 2020
8
January, 2018
8
January, 2021
6
November, 2019
2
December, 2019
2
November, 2020
1
August, 2018
1
March, 2023
1
October, 2022
Available data
130
bed narrowPeak
125
bigWig
100
bam
87
tagAlign
Organism
197
Homo sapiens
Biosample type
151
primary cell
45
in vitro differentiated cells
1
tissue
Organ
20
epithelium
pancreas
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
101
T1D
96
AMP
Genome assembly (visualization)
138
hg19
100
GRCh38
Lab
176
Kyle Gaulton, UCSD
21
AMP-T2D consortium
Audit category:
4
inconsistent ontology term
assay_title!
snDrop-seq
organ_slims!
pancreas
assay_slims!
Transcription
BIOSAMPLE
ASSAY
197 results
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Clear Filters
ChIP-seq
ATAC-seq
pCHi-C
DNAme array
primary cell
monocyte
85
13
1
1
CD8-positive, alpha-beta T cell
33
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
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in vitro differentiated cells
embryonic stem cell
37
5
cardiomyocytes
3
tissue
thymus
1
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