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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
58
total RNA-seq
13
ATAC-seq
12
ChIP-seq
1
DNase-seq
Assay category
58
Transcription
14
DNA accessibility
12
DNA binding
Target of assay
6
histone
6
histone modification
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
2
narrow histone mark
Date released
66
February, 2021
6
January, 2019
4
February, 2023
4
November, 2018
3
December, 2018
1
October, 2017
Available data
80
bam
72
bigWig
58
tsv
22
bed narrowPeak
14
fastq
13
bigBed narrowPeak
4
bed bed3
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
84
Homo sapiens
Biosample type
84
tissue
Organ
658
pancreas
625
liver
589
connective tissue
426
adipose tissue
311
epithelium
188
heart
165
vasculature
164
brain
159
blood vessel
129
kidney
96
limb
93
artery
73
musculature of body
70
bone element
55
blood
55
bodily fluid
34
eye
31
nerve
29
embryo
18
ureter
17
vein
14
spleen
12
skeleton
2
pericardium
1
pituitary gland
Project
84
AMP
Genome assembly (visualization)
84
hg19
82
GRCh38
Lab
84
AMP-T2D consortium
assay_title!
snDrop-seq
BIOSAMPLE
ASSAY
84 results
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total RNA-seq
ATAC-seq
ChIP-seq
DNase-seq
tissue
bone tissue
58
spleen
1
12
1
acetabular part of hip bone
1
distal epiphysis
1
distal epiphysis of femur
1
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