Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
ChIP-seq
Assay category
34
DNA binding
Target of assay
25
transcription factor
20
histone
20
histone modification
13
chromatin remodeller
narrow histone mark
9
broad histone mark
6
RNA binding protein
1
recombinant protein
Date released
10
November, 2017
9
August, 2017
9
December, 2017
5
November, 2018
1
February, 2018
Available data
40
bam
40
bigWig
40
fastq
39
bed narrowPeak
23
bigBed narrowPeak
9
bed bed3+
8
bed broadPeak
8
bigBed broadPeak
tagAlign
Organism
34
Homo sapiens
Biosample type
15
cell line
15
in vitro differentiated cells
3
tissue
1
stem cell
Organ
15
liver
6
connective tissue
3
pancreas
2
embryo
Project
34
AMP
Genome assembly (visualization)
34
hg19
32
GRCh38
Lab
34
AMP-T2D consortium
Audit category:
5
missing controlled_by
Audit category:
34
inconsistent control read length
8
inconsistent control run_type
1
inconsistent assembly
assay_title!
snDrop-seq
target.investigated_as!
narrow histone mark
files.file_type!
tagAlign
BIOSAMPLE
ASSAY
34 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
cell line
HepG2
15
in vitro differentiated cells
adipocyte
6
definitive endodermal cell
3
Posterior foregut
2
pancreatic endoderm
2
primitive gut cell
2
tissue
pancreas
3
stem cell
hESC
1
Download