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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
5
STARR-seq
4
ChIP-seq
1
Hi-C
1
whole genome sequencing assay
Assay category
4
DNA binding
1
3D chromatin structure
1
DNA sequencing
Target of assay
4
control
Date released
11
August, 2021
Available data
1
bedpe bed3+
1
vcf
Organism
11
Homo sapiens
Biosample type
10
cell line
1
tissue
Organ
7
liver
2
kidney
1
pancreas
Project
11
AMP
Genome assembly (visualization)
hg19
1
GRCh38
Lab
927
AMP-T2D consortium
229
Klaus Kaestner, Upenn
92
Katalin Susztak, Upenn
88
Kyle Gaulton, UCSD
47
KPMP
19
Xin Sun, UCSD
11
Bing Ren, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
4
Anna Gloyn, Oxford
1
ITG
1
Maike Sander, UCSD
1
Mark McCarthy, Oxford
Audit category:
1
inconsistent ontology term
assay_title!
total RNA-seq
assembly!
hg19
BIOSAMPLE
ASSAY
11 results
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STARR-seq
ChIP-seq
Hi-C
whole genome sequencing assay
cell line
HepG2
2
4
1
HEK293T
2
Synthesized DNA
1
tissue
islet of Langerhans
1
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