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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
85
single cell RNA-seq
49
ATAC-seq
47
WGBS
21
snATAC-seq
Assay category
85
Transcription
70
DNA accessibility
47
DNA methylation
Date released
134
May, 2022
43
September, 2020
18
February, 2021
7
August, 2020
Available data
153
zippedFastqFolder
50
fastq
10
bigWig
6
tsv
Organism
202
Homo sapiens
Biosample type
202
primary cell
Organ
96
epithelium
96
pancreas
Project
202
HPAP
Genome assembly (visualization)
10
GRCh38
Lab
2653
AMP-T2D consortium
228
Kyle Gaulton, UCSD
202
Klaus Kaestner, Upenn
93
Katalin Susztak, Upenn
47
KPMP
28
Bing Ren, UCSD
20
Karen Mohlke, UNC
19
Xin Sun, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
7
Struan F.A. Grant, CHOP
4
Anna Gloyn, Oxford
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
Audit category:
audit script error
assay_title!
total RNA-seq
audit.ERROR.category!
audit script error
BIOSAMPLE
ASSAY
202 results
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single cell RNA-seq
ATAC-seq
WGBS
snATAC-seq
primary cell
Langerhans cell
85
21
pancreatic alpha cell
29
31
pancreatic beta cell
16
16
pancreatic acinar cell
4
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