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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
12
DNase-seq
total RNA-seq
3
RRBS
Assay category
15
DNA binding
12
DNA accessibility
3
DNA methylation
Target of assay
10
histone
10
histone modification
5
broad histone mark
5
narrow histone mark
3
control
2
RNA binding protein
2
transcription factor
Date released
13
June, 2019
9
October, 2019
5
May, 2019
3
July, 2019
Available data
25
bam
22
bed narrowPeak
22
bigWig
16
bigBed narrowPeak
10
bed bed3+
10
bed broadPeak
10
bigBed broadPeak
3
bed bedMethyl
3
bigBed bedMethyl
Organism
30
Homo sapiens
Biosample type
249
tissue
30
primary cell
15
cell line
Organ
313
epithelium
265
pancreas
35
vasculature
30
kidney
29
blood vessel
29
connective tissue
22
vein
21
brain
13
musculature of body
9
heart
9
liver
8
blood
8
bodily fluid
5
eye
1
adipose tissue
1
bone element
1
bone marrow
Project
30
AMP
Genome assembly (visualization)
22
GRCh38
19
hg19
Lab
30
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
30 results
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ChIP-seq
DNase-seq
RRBS
primary cell
epithelial cell of proximal tubule
10
1
1
kidney epithelial cell
5
1
1
kidney tubule cell
3
glomerular visceral epithelial cell
2
kidney glomerular epithelial cell
2
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