Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
11
ATAC-seq
11
single cell RNA-seq
6
snATAC-seq
1
Hi-C
Assay category
17
DNA accessibility
11
Transcription
1
3D chromatin structure
Date released
15
August, 2021
14
May, 2023
Available data
bed narrowPeak
64
xls
8
txt
1
hic
Organism
29
Homo sapiens
Biosample type
29
tissue
Organ
29
kidney
Project
29
AMP
Genome assembly (visualization)
11
GRCh38
1
hg19
Lab
1122
AMP-T2D consortium
232
Klaus Kaestner, Upenn
96
Kyle Gaulton, UCSD
47
KPMP
29
Katalin Susztak, Upenn
19
Xin Sun, UCSD
14
Bing Ren, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
4
Anna Gloyn, Oxford
3
Struan F.A. Grant, CHOP
2
Mark McCarthy, Oxford
1
ITG
1
Maike Sander, UCSD
1
Stephen Parker, UMich
assay_title!
total RNA-seq
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
29 results
search-icon
table-tab-icon
Clear Filters
ATAC-seq
single cell RNA-seq
snATAC-seq
Hi-C
tissue
kidney
11
11
6
1
Download