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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
24
ChIP-seq
2
WGBS
2
pCHi-C
1
ATAC-seq
1
DNase-seq
Assay category
24
DNA binding
2
DNA accessibility
2
DNA methylation
Target of assay
10
histone
10
histone modification
8
control
6
narrow histone mark
6
transcription factor
4
broad histone mark
3
other context
3
other post-translational modification
Date released
9
November, 2018
7
December, 2018
7
January, 2019
4
October, 2019
2
March, 2020
1
October, 2017
Available data
24
bam
24
fastq
16
bigWig
14
bed narrowPeak
13
bigBed narrowPeak
2
bed bedMethyl
2
bigBed bedMethyl
2
tsv
1
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
Organism
30
Homo sapiens
Biosample type
30
tissue
Organ
601
liver
543
pancreas
393
epithelium
321
heart
289
kidney
269
brain
210
connective tissue
175
vasculature
169
blood vessel
115
limb
97
bone element
93
adipose tissue
90
musculature of body
85
artery
69
blood
69
bodily fluid
42
eye
38
nerve
25
spleen
23
embryo
22
vein
20
lung
18
ureter
12
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
30
AMP
Genome assembly (visualization)
16
GRCh38
14
hg19
Lab
30
AMP-T2D consortium
assay_title!
total RNA-seq
files.file_type!
csv
BIOSAMPLE
ASSAY
30 results
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ChIP-seq
WGBS
pCHi-C
ATAC-seq
DNase-seq
tissue
spleen
20
2
1
1
1
islet of Langerhans
4
ovary
1
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