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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
15
ChIP-seq
Assay category
15
DNA binding
Target of assay
11
transcription factor
6
chromatin remodeller
4
histone
4
histone modification
2
RNA binding protein
2
broad histone mark
2
narrow histone mark
Date released
10
November, 2017
3
October, 2017
2
November, 2018
Available data
89
fastq
88
bam
86
bigWig
48
bed narrowPeak
15
bigBed narrowPeak
14
bed bed3+
4
tagAlign
2
bed broadPeak
0
zippedFastqFolder
Organism
15
Homo sapiens
Biosample type
12
cell line
3
tissue
Organ
12
liver
3
brain
Project
15
AMP
Genome assembly (visualization)
15
hg19
8
GRCh38
Lab
15
AMP-T2D consortium
Audit category:
15
missing controlled_by
Audit category:
6
inconsistent control run_type
5
inconsistent control read length
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
15 results
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ChIP-seq
cell line
HepG2
12
tissue
brain
3
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