Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
8
single cell RNA-seq
1
Hi-C
Assay category
8
Transcription
1
3D chromatin structure
Date released
6
February, 2021
1
March, 2019
1
November, 2018
1
September, 2018
Available data
2104
bam
1885
bigWig
1817
bed narrowPeak
1115
fastq
1042
bigBed narrowPeak
398
tagAlign
322
bed broadPeak
285
bigBed broadPeak
279
tsv
271
bed bed3+
153
zippedFastqFolder
102
txt
64
xls
36
bed bedMethyl
36
bigBed bedMethyl
23
bedpe bed3+
23
hic
12
bed bed3
8
csv
7
bed bedgraph
5
hdf5
4
tar
3
cool
2
ibed
1
bedpe
1
tagAlign bed3+
1
vcf
Organism
9
Homo sapiens
Biosample type
7
tissue
2
primary cell
Organ
5
kidney
1
liver
1
pancreas
Project
9
AMP
Genome assembly (visualization)
1
hg19
Lab
8
AMP-T2D consortium
1
Bing Ren, UCSD
Audit category:
5
audit script error
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
9 results
search-icon
table-tab-icon
Clear Filters
single cell RNA-seq
Hi-C
tissue
kidney
5
islet of Langerhans
1
liver
1
primary cell
pancreatic cell
2
Download