Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
ChIP-seq
total RNA-seq
8
ATAC-seq
Assay category
39
DNA binding
8
DNA accessibility
Target of assay
28
histone
28
histone modification
18
broad histone mark
11
control
10
narrow histone mark
Date released
406
November, 2017
322
August, 2017
284
October, 2019
245
August, 2021
218
June, 2019
217
May, 2021
174
May, 2022
170
February, 2021
151
May, 2020
120
May, 2019
112
February, 2023
94
December, 2017
88
November, 2018
80
April, 2019
74
October, 2018
64
July, 2019
49
March, 2020
48
July, 2018
47
September, 2018
47
September, 2023
43
April, 2018
43
September, 2020
41
November, 2019
40
May, 2024
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
12
November, 2020
11
September, 2017
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
41
fastq
39
bam
30
bigWig
28
bed narrowPeak
14
tagAlign
6
bigBed narrowPeak
4
bed broadPeak
Organism
47
Homo sapiens
Biosample type
24
in vitro differentiated cells
23
tissue
Organ
16
brain
9
embryo
5
pancreas
1
adipose tissue
1
connective tissue
1
spleen
Project
47
AMP
Genome assembly (visualization)
30
GRCh38
29
hg19
Lab
46
AMP-T2D consortium
1
Stephen Parker, UMich
Audit category:
4
missing controlled_by
Audit category:
2
inconsistent control read length
assay_title!
total RNA-seq
month_released!
January, 2018
BIOSAMPLE
ASSAY
47 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
ATAC-seq
in vitro differentiated cells
pancreatic endoderm
9
definitive endodermal cell
3
embryonic stem cell
3
endocrine cell
3
posterior foregut
3
+ See 1 more…
tissue
brain
15
body of pancreas
4
cerebellum (Hemisphere)
1
islet of Langerhans
1
omental fat pad
1
+ See 1 more…
See all biosamples
Download