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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
25
ChIP-seq
11
ATAC-seq
total RNA-seq
3
single cell RNA-seq
Assay category
25
DNA binding
11
DNA accessibility
3
Transcription
Target of assay
14
transcription factor
7
histone
7
histone modification
6
RNA binding protein
6
chromatin remodeller
4
broad histone mark
4
control
3
narrow histone mark
Date released
406
November, 2017
322
August, 2017
284
October, 2019
245
August, 2021
218
June, 2019
217
May, 2021
174
May, 2022
170
February, 2021
151
May, 2020
120
May, 2019
112
February, 2023
94
December, 2017
88
November, 2018
80
April, 2019
74
October, 2018
64
July, 2019
49
March, 2020
48
July, 2018
47
September, 2018
47
September, 2023
43
April, 2018
43
September, 2020
41
November, 2019
40
May, 2024
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
12
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
25
bam
25
fastq
21
bed narrowPeak
21
bigBed narrowPeak
21
bigWig
Organism
39
Homo sapiens
Biosample type
21
tissue
18
cell line
Organ
18
blood
18
bodily fluid
14
kidney
7
spleen
Project
39
AMP
Genome assembly (visualization)
32
GRCh38
21
hg19
Lab
25
AMP-T2D consortium
14
Katalin Susztak, Upenn
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
39 results
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Clear Filters
ChIP-seq
ATAC-seq
single cell RNA-seq
tissue
kidney
11
3
spleen
7
cell line
GM12878
18
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