Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
10
Hi-C
3
ChIP-seq
2
ATAC-seq
2
pCHi-C
total RNA-seq
Assay category
10
3D chromatin structure
3
DNA binding
2
DNA accessibility
Target of assay
3
histone
3
histone modification
3
narrow histone mark
Date released
406
November, 2017
322
August, 2017
284
October, 2019
218
June, 2019
217
May, 2021
174
May, 2022
156
February, 2021
150
May, 2020
147
August, 2021
120
May, 2019
100
February, 2023
94
December, 2017
88
November, 2018
80
April, 2019
74
October, 2018
47
September, 2018
47
September, 2023
43
July, 2019
43
September, 2020
41
November, 2019
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
17
March, 2020
16
January, 2021
14
May, 2023
12
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
October, 2022
1
August, 2018
1
August, 2022
1
December, 2019
Available data
tsv
12
bedpe bed3+
10
hic
7
bigWig
3
bam
3
bed narrowPeak
2
ibed
Organism
17
Homo sapiens
Biosample type
10
tissue
4
in vitro differentiated cells
2
cell line
1
primary cell
Organ
6
pancreas
3
epithelium
2
blood vessel
2
heart
2
musculature of body
2
vasculature
1
liver
1
vein
Project
14
AMP
3
T1D
Genome assembly (visualization)
17
hg19
3
GRCh38
Lab
17
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
assay_title!
total RNA-seq
files.file_type!
tsv
BIOSAMPLE
ASSAY
17 results
search-icon
table-tab-icon
Clear Filters
Hi-C
ChIP-seq
ATAC-seq
pCHi-C
tissue
islet of Langerhans
2
1
psoas muscle
2
aorta
1
heart left ventricle
1
heart right ventricle
1
+ See 2 more…
in vitro differentiated cells
cardiomyocytes (cardiac muscle cell)
1
1
lymphocyte of B lineage (iPSC)
1
1
cell line
EndoC_BH1
1
1
primary cell
endothelial cell of umbilical vein
1
See all biosamples
Download