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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
81
ATAC-seq
41
WGBS
33
single cell RNA-seq
total RNA-seq
21
snATAC-seq
1
Hi-C
Assay category
102
DNA accessibility
41
DNA methylation
33
Transcription
1
3D chromatin structure
Date released
406
November, 2017
296
August, 2017
284
October, 2019
245
August, 2021
217
May, 2021
175
June, 2019
172
May, 2022
170
February, 2021
151
May, 2020
113
May, 2019
112
February, 2023
94
December, 2017
88
November, 2018
80
April, 2019
74
October, 2018
56
July, 2019
49
April, 2018
48
July, 2018
47
September, 2018
47
September, 2023
46
March, 2020
43
September, 2020
41
November, 2019
40
May, 2024
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
12
November, 2020
11
September, 2017
7
August, 2020
7
January, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
134
zippedFastqFolder
38
bed narrowPeak
20
bigWig
19
bam
19
fastq
1
bed broadPeak
1
bedpe
1
hic
Organism
177
Homo sapiens
Biosample type
134
primary cell
43
tissue
Organ
103
pancreas
80
epithelium
20
liver
musculature of body
Project
134
HPAP
43
AMP
Genome assembly (visualization)
41
hg19
2
GRCh38
Lab
134
Klaus Kaestner, Upenn
20
Karen Mohlke, UNC
18
Kyle Gaulton, UCSD
2
Bing Ren, UCSD
2
Mark McCarthy, Oxford
1
Maike Sander, UCSD
assay_title!
total RNA-seq
organ_slims!
musculature of body
BIOSAMPLE
ASSAY
177 results
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Clear Filters
ATAC-seq
WGBS
single cell RNA-seq
snATAC-seq
Hi-C
primary cell
Langerhans cell
33
21
pancreatic alpha cell
22
25
pancreatic beta cell
13
16
pancreatic acinar cell
4
tissue
islet of Langerhans
22
1
liver
20
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