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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
39
ATAC-seq
total RNA-seq
10
MeRIP-seq
1
DNase-seq
1
single cell RNA-seq
1
snATAC-seq
Assay category
41
DNA accessibility
1
Transcription
Target of assay
5
control
5
nucleotide modification
Date released
406
November, 2017
322
August, 2017
284
October, 2019
245
August, 2021
218
June, 2019
217
May, 2021
151
May, 2020
125
February, 2021
120
May, 2019
112
February, 2023
94
December, 2017
88
November, 2018
80
April, 2019
74
October, 2018
64
July, 2019
49
April, 2018
49
March, 2020
48
July, 2018
47
September, 2018
47
September, 2023
41
November, 2019
40
May, 2022
40
May, 2024
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
12
November, 2020
11
September, 2017
8
January, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
3
June, 2018
1
August, 2022
1
October, 2022
Available data
40
bed narrowPeak
21
bigWig
20
bam
18
fastq
2
bed bed3+
1
bed broadPeak
1
bigBed broadPeak
1
bigBed narrowPeak
1
txt
Organism
52
Homo sapiens
Biosample type
44
tissue
6
cell line
2
primary cell
Organ
28
pancreas
20
liver
6
epithelium
2
connective tissue
2
musculature of body
Project
HPAP
52
AMP
Genome assembly (visualization)
41
hg19
2
GRCh38
Lab
20
Karen Mohlke, UNC
18
Kyle Gaulton, UCSD
10
Rohit N. Kulkarni, M.D., Ph.D.
4
AMP-T2D consortium
Audit category:
6
inconsistent ontology term
1
audit script error
assay_title!
total RNA-seq
award.project!
HPAP
BIOSAMPLE
ASSAY
52 results
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Clear Filters
ATAC-seq
MeRIP-seq
DNase-seq
single cell RNA-seq
snATAC-seq
tissue
islet of Langerhans
18
4
liver
20
skeletal muscle tissue
1
1
cell line
EndoC_BH1
6
primary cell
osteoblast
1
1
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