Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
7
WGBS
1
single cell RNA-seq
Assay category
70
DNA binding
DNA accessibility
7
DNA methylation
1
Transcription
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
406
November, 2017
311
August, 2017
251
October, 2019
183
May, 2021
163
August, 2021
121
February, 2021
120
May, 2019
94
December, 2017
80
April, 2019
78
November, 2018
75
May, 2022
74
October, 2018
56
July, 2019
51
May, 2020
48
July, 2018
47
September, 2023
45
March, 2020
43
April, 2018
40
May, 2024
40
September, 2020
35
December, 2018
33
September, 2018
31
June, 2019
25
January, 2019
24
February, 2018
15
November, 2019
15
October, 2017
10
November, 2020
9
April, 2020
7
February, 2023
6
September, 2017
5
December, 2019
5
January, 2018
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
3
May, 2023
1
March, 2019
Available data
78
fastq
77
bam
70
bigWig
63
bed narrowPeak
63
bigBed narrowPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
78
Homo sapiens
Biosample type
61
cell line
16
tissue
1
primary cell
Organ
50
liver
15
blood
15
bodily fluid
8
spleen
4
pancreas
Project
78
AMP
Genome assembly (visualization)
70
GRCh38
61
hg19
Lab
78
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
assay_title!
total RNA-seq
assay_title!!
total RNA-seq
assay_slims!
DNA accessibility
BIOSAMPLE
ASSAY
78 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
WGBS
single cell RNA-seq
cell line
HepG2
45
1
GM12878
15
tissue
spleen
6
2
liver
4
body of pancreas
2
pancreas
2
primary cell
pancreatic cell
1
Download