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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
115
ChIP-seq
7
WGBS
6
RRBS
1
DNase-seq
1
single cell RNA-seq
Assay category
115
DNA binding
13
DNA methylation
1
DNA accessibility
1
Transcription
Target of assay
96
histone
96
histone modification
60
broad histone mark
36
narrow histone mark
19
control
Date released
211
August, 2021
156
May, 2022
143
February, 2021
129
August, 2017
113
May, 2021
112
February, 2023
56
May, 2020
50
October, 2019
47
September, 2023
46
March, 2020
43
September, 2020
40
May, 2024
26
July, 2019
19
April, 2020
16
January, 2021
14
May, 2023
14
November, 2017
10
November, 2020
8
January, 2018
8
October, 2017
7
August, 2020
5
December, 2019
5
March, 2023
4
March, 2019
4
October, 2022
2
November, 2019
1
April, 2019
1
August, 2018
1
August, 2022
1
December, 2018
1
November, 2018
1
September, 2018
Available data
286
fastq
bam
263
bigWig
215
bed narrowPeak
115
bigBed narrowPeak
85
tagAlign
50
bed broadPeak
42
bed bed3+
24
bigBed broadPeak
13
bed bedMethyl
13
bigBed bedMethyl
1
csv
Organism
130
Homo sapiens
Biosample type
114
tissue
14
in vitro differentiated cells
2
primary cell
Organ
54
connective tissue
40
adipose tissue
28
liver
26
musculature of body
20
pancreas
Project
130
AMP
Genome assembly (visualization)
24
hg19
Lab
130
AMP-T2D consortium
assay_title!
total RNA-seq
files.file_type!
bam
BIOSAMPLE
ASSAY
130 results
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Clear Filters
ChIP-seq
WGBS
RRBS
DNase-seq
single cell RNA-seq
tissue
subcutaneous abdominal adipose tissue
36
3
liver
23
3
1
skeletal muscle tissue
22
4
islet of Langerhans
20
adipose tissue
1
+ See 1 more…
in vitro differentiated cells
adipocyte
14
primary cell
pancreatic cell
1
skeletal muscle myoblast
1
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