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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
26
ATAC-seq
total RNA-seq
3
ChIP-seq
2
Hi-C
Assay category
26
DNA accessibility
3
DNA binding
2
3D chromatin structure
Target of assay
10
histone
histone modification
6
broad histone mark
4
narrow histone mark
2
control
1
RNA binding protein
1
transcription factor
Date released
318
November, 2017
225
August, 2021
199
June, 2019
174
May, 2022
170
February, 2021
124
May, 2020
123
August, 2017
112
February, 2023
88
November, 2018
88
October, 2019
77
May, 2021
64
July, 2019
63
December, 2017
48
July, 2018
47
September, 2023
46
March, 2020
44
October, 2018
43
April, 2018
43
September, 2020
35
December, 2018
31
November, 2019
28
May, 2019
20
April, 2019
19
April, 2020
18
January, 2019
16
January, 2021
15
September, 2018
14
May, 2023
12
November, 2020
11
October, 2017
11
September, 2017
8
February, 2018
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
29
bam
27
bed narrowPeak
2
bedpe bed3+
2
hic
1
bigWig
Organism
31
Homo sapiens
Biosample type
21
tissue
5
cell line
5
in vitro differentiated cells
Organ
25
pancreas
5
epithelium
1
adipose tissue
1
connective tissue
Project
31
AMP
Genome assembly (visualization)
29
hg19
27
GRCh38
Lab
31
AMP-T2D consortium
Audit category:
11
inconsistent ontology term
assay_title!
total RNA-seq
target.investigated_as!
histone modification
BIOSAMPLE
ASSAY
31 results
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Clear Filters
ATAC-seq
ChIP-seq
Hi-C
tissue
islet of Langerhans
19
1
adipose tissue(adipose white tissue)
1
cell line
EndoC_BH1
1
3
1
in vitro differentiated cells
Pancreatic progenitors (progenitor cell of endocrine pancreas)
5
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