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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
ChIP-seq
10
MeRIP-seq
total RNA-seq
1
ATAC-seq
DNase-seq
1
Hi-C
Assay category
34
DNA binding
1
3D chromatin structure
1
DNA accessibility
Target of assay
28
transcription factor
9
control
5
nucleotide modification
2
RNA binding protein
2
chromatin remodeller
Date released
406
November, 2017
317
August, 2017
274
October, 2019
245
August, 2021
217
May, 2021
174
May, 2022
170
February, 2021
151
May, 2020
120
May, 2019
112
February, 2023
94
December, 2017
80
April, 2019
79
November, 2018
74
October, 2018
64
July, 2019
49
March, 2020
48
July, 2018
47
September, 2018
47
September, 2023
43
April, 2018
43
September, 2020
41
November, 2019
35
December, 2018
31
June, 2019
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
11
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
35
bam
35
fastq
31
bed narrowPeak
30
bigBed narrowPeak
30
bigWig
Organism
46
Homo sapiens
Biosample type
34
cell line
11
tissue
1
primary cell
Organ
27
blood
27
bodily fluid
10
pancreas
7
spleen
6
epithelium
1
connective tissue
1
liver
Project
46
AMP
Genome assembly (visualization)
31
GRCh38
31
hg19
Lab
36
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
6
inconsistent ontology term
1
inconsistent control
assay_title!
total RNA-seq
DNase-seq
BIOSAMPLE
ASSAY
46 results
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Clear Filters
ChIP-seq
MeRIP-seq
ATAC-seq
Hi-C
cell line
GM12878
27
EndoC_BH1
6
HepG2
1
tissue
spleen
7
islet of Langerhans
4
primary cell
osteoblast
1
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