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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
101
ATAC-seq
50
ChIP-seq
10
MeRIP-seq
DNase-seq
1
pCHi-C
Assay category
101
DNA accessibility
50
DNA binding
Target of assay
28
control
27
histone
27
histone modification
27
narrow histone mark
5
nucleotide modification
Date released
406
November, 2017
317
August, 2017
274
October, 2019
245
August, 2021
217
May, 2021
174
May, 2022
170
February, 2021
151
May, 2020
120
May, 2019
112
February, 2023
94
December, 2017
80
April, 2019
79
November, 2018
74
October, 2018
64
July, 2019
49
March, 2020
48
July, 2018
47
September, 2018
47
September, 2023
43
April, 2018
43
September, 2020
41
November, 2019
40
May, 2024
35
December, 2018
31
June, 2019
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
11
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
96
bam
72
bigWig
50
tagAlign
28
bed narrowPeak
1
tsv
Organism
162
Homo sapiens
Biosample type
101
primary cell
54
tissue
7
cell line
Organ
51
liver
10
pancreas
6
epithelium
1
connective tissue
Project
162
AMP
Genome assembly (visualization)
73
hg19
20
GRCh38
Lab
152
AMP-T2D consortium
10
Rohit N. Kulkarni, M.D., Ph.D.
Audit category:
10
inconsistent ontology term
assay_title!
total RNA-seq
DNase-seq
BIOSAMPLE
ASSAY
162 results
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Clear Filters
ATAC-seq
ChIP-seq
MeRIP-seq
pCHi-C
primary cell
CD4-positive, alpha-beta memory T cell
22
naive thymus-derived CD4-positive, alpha-beta T cell
22
macrophage
11
B cell
2
CD8-positive, alpha-beta T cell
2
+ See 24 more…
tissue
liver
50
islet of Langerhans
4
cell line
EndoC_BH1
6
HepG2
1
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