Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
70
ChIP-seq
10
DNase-seq
7
WGBS
total RNA-seq
1
ATAC-seq
1
FAIRE-seq
Assay category
70
DNA binding
12
DNA accessibility
7
DNA methylation
Target of assay
64
transcription factor
21
RNA binding protein
16
recombinant protein
7
chromatin remodeller
6
control
3
other context
3
other post-translational modification
Date released
392
November, 2017
234
October, 2019
218
June, 2019
193
August, 2017
120
May, 2019
104
May, 2021
95
May, 2020
94
December, 2017
87
November, 2018
79
April, 2019
74
October, 2018
48
July, 2018
46
September, 2018
43
April, 2018
39
November, 2019
38
July, 2019
34
August, 2021
34
December, 2018
27
February, 2021
25
January, 2019
24
February, 2018
18
May, 2022
15
October, 2017
11
September, 2017
3
August, 2018
3
June, 2018
3
March, 2020
2
November, 2020
1
March, 2019
Available data
89
bam
88
fastq
81
bigWig
75
bed narrowPeak
74
bigBed narrowPeak
10
bed bed3+
10
bed broadPeak
10
bigBed broadPeak
7
bed bedMethyl
7
bigBed bedMethyl
1
csv
Organism
89
Homo sapiens
Biosample type
61
cell line
26
tissue
2
primary cell
Organ
53
liver
15
blood
15
bodily fluid
9
spleen
7
pancreas
3
connective tissue
2
brain
1
adipose tissue
Project
89
AMP
Genome assembly (visualization)
81
GRCh38
73
hg19
Lab
89
AMP-T2D consortium
Audit category:
3
missing controlled_by
Audit category:
5
inconsistent control read length
4
inconsistent control run_type
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
89 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
DNase-seq
WGBS
ATAC-seq
FAIRE-seq
cell line
HepG2
45
1
GM12878
15
tissue
spleen
6
1
2
liver
4
2
body of pancreas
2
2
pancreas
2
1
brain
2
+ See 2 more…
primary cell
osteoblast
1
1
See all biosamples
Download