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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
6
ChIP-seq
5
ATAC-seq
1
CRISPR RNA-seq
1
CRISPRi RNA-seq
1
Hi-C
1
shRNA RNA-seq
1
siRNA RNA-seq
Assay category
6
DNA binding
5
DNA accessibility
4
Transcription
1
3D chromatin structure
Target of assay
6
control
Date released
406
November, 2017
322
August, 2017
284
October, 2019
245
August, 2021
218
June, 2019
217
May, 2021
174
May, 2022
170
February, 2021
151
May, 2020
120
May, 2019
112
February, 2023
94
December, 2017
88
November, 2018
80
April, 2019
74
October, 2018
64
July, 2019
49
March, 2020
48
July, 2018
47
September, 2018
47
September, 2023
43
April, 2018
43
September, 2020
41
November, 2019
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
12
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
11
bam
11
fastq
5
bed narrowPeak
5
bigBed narrowPeak
5
bigWig
2
bed bed3+
1
hic
Organism
12
Homo sapiens
Biosample type
6
primary cell
6
tissue
2
cell line
2
stem cell
Organ
11
pancreas
5
epithelium
Project
11
AMP
4
community
1
ITG
Genome assembly (visualization)
8
GRCh38
7
hg19
Lab
11
AMP-T2D consortium
4
Anna Gloyn, Oxford
1
ITG
assay_title!
total RNA-seq
BIOSAMPLE
ASSAY
16 results
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Clear Filters
ChIP-seq
ATAC-seq
CRISPR RNA-seq
CRISPRi RNA-seq
Hi-C
shRNA RNA-seq
siRNA RNA-seq
primary cell
pancreatic alpha cell
2
pancreatic beta cell
2
chondrocytes
1
pancreatic acinar cell
1
tissue
islet of Langerhans
6
cell line
EndoC-BH1
1
1
stem cell
SB Ad3.1
1
1
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