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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
total RNA-seq
45
ChIP-seq
21
ATAC-seq
17
pCHi-C
1
DNAme array
Assay category
45
DNA binding
21
DNA accessibility
1
DNA methylation
Target of assay
24
histone
24
histone modification
12
broad histone mark
12
narrow histone mark
12
transcription factor
9
control
5
RNA binding protein
Date released
147
February, 2021
138
August, 2021
136
May, 2022
126
August, 2017
124
May, 2020
94
October, 2019
93
November, 2017
84
May, 2021
54
July, 2019
49
April, 2018
48
July, 2018
47
February, 2023
47
September, 2023
45
March, 2020
43
September, 2020
23
May, 2019
22
December, 2017
19
April, 2020
16
January, 2021
15
April, 2019
15
November, 2018
14
May, 2023
11
October, 2017
11
October, 2018
10
November, 2020
8
February, 2018
8
June, 2019
7
August, 2020
7
January, 2018
6
September, 2017
5
December, 2018
5
December, 2019
5
March, 2019
5
March, 2023
4
January, 2019
4
November, 2019
4
October, 2022
3
August, 2018
3
June, 2018
1
August, 2022
1
September, 2018
Available data
bed narrowPeak
128
bigWig
104
bam
90
tagAlign
Organism
84
Homo sapiens
Biosample type
43
in vitro differentiated cells
24
primary cell
16
cell line
1
tissue
Organ
17
epithelium
17
pancreas
1
bone element
1
bone marrow
1
connective tissue
1
thymus
Project
67
AMP
17
T1D
Genome assembly (visualization)
8
hg19
Lab
62
Kyle Gaulton, UCSD
22
AMP-T2D consortium
Audit category:
17
inconsistent ontology term
assay_title!
total RNA-seq
organ_slims!
adipose tissue
files.file_type!
bed narrowPeak
BIOSAMPLE
ASSAY
84 results
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Clear Filters
ChIP-seq
ATAC-seq
pCHi-C
DNAme array
in vitro differentiated cells
embryonic stem cell
37
5
pancreatic PP cell
1
primary cell
CD8-positive, alpha-beta T cell
3
1
monocyte
1
1
1
naive thymus-derived CD4-positive, alpha-beta T cell
2
1
CD4-positive, alpha-beta T cell
2
neutrophil
1
1
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cell line
EndoC_BH1
16
tissue
thymus
1
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