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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
DNase-seq
30
ChIP-seq
total RNA-seq
1
ATAC-seq
1
WGBS
Assay category
35
DNA accessibility
30
DNA binding
1
DNA methylation
Target of assay
30
histone
30
histone modification
20
broad histone mark
10
narrow histone mark
Date released
32
June, 2019
27
October, 2019
6
May, 2019
1
July, 2019
Available data
84
bam
71
bed narrowPeak
66
bigWig
64
bigBed narrowPeak
34
bed bed3+
34
bed broadPeak
34
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
66
Homo sapiens
Biosample type
66
tissue
Organ
463
liver
293
pancreas
225
epithelium
217
brain
155
heart
120
kidney
103
connective tissue
97
vasculature
blood vessel
87
limb
64
musculature of body
55
blood
55
bodily fluid
31
artery
30
adipose tissue
27
nerve
18
ureter
16
spleen
15
embryo
15
vein
6
eye
1
pituitary gland
Project
66
AMP
Genome assembly (visualization)
65
GRCh38
65
hg19
Lab
66
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
total RNA-seq
organ_slims!
blood vessel
BIOSAMPLE
ASSAY
66 results
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DNase-seq
ChIP-seq
ATAC-seq
WGBS
tissue
tibial nerve
2
24
1
muscle of leg
13
6
1
muscle of arm
17
forelimb muscle
1
hindlimb muscle
1
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