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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
34
DNase-seq
31
ChIP-seq
7
ATAC-seq
4
Hi-C
total RNA-seq
1
WGBS
Assay category
41
DNA accessibility
31
DNA binding
4
3D chromatin structure
1
DNA methylation
Target of assay
25
histone
25
histone modification
18
broad histone mark
7
narrow histone mark
6
control
Date released
32
June, 2019
27
October, 2019
7
May, 2019
6
February, 2021
5
July, 2019
Available data
72
bam
65
bed narrowPeak
60
bigWig
58
bigBed narrowPeak
34
bed bed3+
34
bed broadPeak
34
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
77
Homo sapiens
Biosample type
77
tissue
Organ
602
liver
543
pancreas
393
epithelium
321
heart
294
kidney
269
brain
210
connective tissue
175
vasculature
169
blood vessel
115
limb
97
bone element
93
adipose tissue
90
musculature of body
85
artery
69
blood
69
bodily fluid
42
eye
nerve
25
spleen
23
embryo
22
vein
lung
18
ureter
12
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
77
AMP
Genome assembly (visualization)
65
GRCh38
65
hg19
Lab
77
AMP-T2D consortium
Audit category:
1
inconsistent ontology term
assay_title!
total RNA-seq
organ_slims!
nerve
lung
BIOSAMPLE
ASSAY
77 results
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DNase-seq
ChIP-seq
ATAC-seq
Hi-C
WGBS
tissue
tibial artery
2
23
1
muscle of leg
13
7
1
muscle of arm
17
gastrocnemius medialis
4
distal epiphysis of femur
1
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