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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
33
DNase-seq
13
ChIP-seq
total RNA-seq
2
small RNA-seq
1
WGBS
Assay category
33
DNA accessibility
13
DNA binding
2
Transcription
1
DNA methylation
Target of assay
13
histone
13
histone modification
8
broad histone mark
5
narrow histone mark
Date released
41
June, 2019
5
May, 2019
3
July, 2019
Available data
49
bam
49
bigWig
46
bed narrowPeak
46
bigBed narrowPeak
33
bed bed3+
33
bed broadPeak
33
bigBed broadPeak
2
tsv
1
bed bedMethyl
1
bigBed bedMethyl
Organism
49
Homo sapiens
Biosample type
39
tissue
10
primary cell
Organ
372
liver
311
pancreas
218
epithelium
212
brain
197
heart
194
kidney
133
vasculature
129
blood vessel
98
connective tissue
92
limb
74
artery
54
blood
54
bodily fluid
49
musculature of body
28
adipose tissue
27
nerve
18
ureter
16
spleen
15
embryo
vein
8
bone element
8
skeleton
6
eye
1
pituitary gland
Project
49
AMP
Genome assembly (visualization)
69
hg19
49
GRCh38
Lab
49
AMP-T2D consortium
Audit category:
8
inconsistent ontology term
assay_title!
total RNA-seq
organ_slims!
vein
BIOSAMPLE
ASSAY
49 results
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DNase-seq
ChIP-seq
small RNA-seq
WGBS
tissue
muscle of leg
13
5
1
muscle of arm
17
forelimb muscle
1
hindlimb muscle
1
skeletal muscle tissue
1
primary cell
skeletal muscle satellite cell
7
1
skeletal muscle cell
1
1
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