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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
60
ChIP-seq
snATAC-seq
1
ATAC-seq
1
pCHi-C
Assay category
60
DNA binding
1
DNA accessibility
Target of assay
51
transcription factor
10
RNA binding protein
10
chromatin remodeller
6
control
1
histone
1
histone modification
1
narrow histone mark
Date released
27
December, 2018
18
January, 2019
15
November, 2018
1
January, 2018
1
March, 2020
Available data
60
bam
60
fastq
55
bigWig
54
bed narrowPeak
54
bigBed narrowPeak
1
tsv
Organism
62
Homo sapiens
Biosample type
61
cell line
1
tissue
Organ
602
liver
532
pancreas
393
epithelium
321
heart
288
kidney
269
brain
210
connective tissue
175
vasculature
169
blood vessel
115
limb
97
bone element
93
adipose tissue
89
musculature of body
85
artery
61
blood
61
bodily fluid
42
eye
38
nerve
25
spleen
23
embryo
22
vein
18
ureter
12
skeleton
10
lung
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
62
AMP
Genome assembly (visualization)
55
hg19
54
GRCh38
Lab
62
AMP-T2D consortium
Audit category:
1
inconsistent control
1
inconsistent ontology term
assay_title!
total RNA-seq
snATAC-seq
BIOSAMPLE
ASSAY
62 results
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ChIP-seq
ATAC-seq
pCHi-C
cell line
GM12878
60
1
tissue
bladder (urinary bladder)
1
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