Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
54
ChIP-seq
8
snATAC-seq
1
ATAC-seq
Assay category
54
DNA binding
9
DNA accessibility
Target of assay
51
transcription factor
10
RNA binding protein
10
chromatin remodeller
control
1
histone
1
histone modification
1
narrow histone mark
Date released
27
December, 2018
15
January, 2019
12
November, 2018
8
January, 2021
1
January, 2018
Available data
55
bigWig
54
bam
54
bed narrowPeak
54
bigBed narrowPeak
54
fastq
Organism
63
Homo sapiens
Biosample type
55
cell line
8
primary cell
Organ
494
liver
490
pancreas
363
epithelium
301
heart
282
kidney
238
brain
175
connective tissue
153
vasculature
148
blood vessel
98
limb
97
bone element
84
musculature of body
76
artery
69
adipose tissue
63
blood
63
bodily fluid
41
eye
27
nerve
20
lung
20
vein
18
ureter
17
spleen
16
embryo
12
skeleton
5
gonad
5
ovary
2
intestine
2
pituitary gland
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
large intestine
1
lymph node
1
mammary gland
1
pericardium
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
55
AMP
8
T1D
Genome assembly (visualization)
55
hg19
54
GRCh38
Lab
55
AMP-T2D consortium
8
Kyle Gaulton, UCSD
Audit category:
1
inconsistent control
assay_title!
total RNA-seq
target.investigated_as!
control
BIOSAMPLE
ASSAY
63 results
search-icon
table-tab-icon
Clear Filters
ChIP-seq
snATAC-seq
ATAC-seq
cell line
GM12878
54
1
primary cell
peripheral blood mononuclear cell
8
Download