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Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
28
ATAC-seq
total RNA-seq
4
DNase-seq
4
pCHi-C
2
ChIP-seq
1
RRBS
Assay category
32
DNA accessibility
2
DNA binding
1
DNA methylation
Target of assay
histone
3
histone modification
3
narrow histone mark
1
RNA binding protein
1
control
1
transcription factor
Date released
27
February, 2023
6
June, 2019
5
October, 2019
1
July, 2019
Available data
32
bed narrowPeak
6
bam
5
bigBed narrowPeak
5
bigWig
4
bed bed3+
4
bed broadPeak
4
bigBed broadPeak
1
bed bedMethyl
1
bigBed bedMethyl
Organism
39
Homo sapiens
Biosample type
35
tissue
4
primary cell
Organ
500
liver
390
pancreas
299
epithelium
263
kidney
224
heart
132
connective tissue
103
vasculature
98
blood vessel
97
bone element
81
brain
68
blood
68
bodily fluid
66
limb
65
artery
61
adipose tissue
57
musculature of body
39
eye
20
lung
19
spleen
18
ureter
14
nerve
12
skeleton
11
embryo
6
vein
2
intestine
2
thymus
1
adrenal gland
1
bone marrow
1
esophagus
1
gonad
1
large intestine
1
mammary gland
1
ovary
1
pericardium
1
pituitary gland
1
skin of body
1
small intestine
1
stomach
1
urinary bladder
Project
39
AMP
Genome assembly (visualization)
33
hg19
5
GRCh38
Lab
39
AMP-T2D consortium
assay_title!
total RNA-seq
FAIRE-seq
target.investigated_as!
histone
BIOSAMPLE
ASSAY
39 results
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Clear Filters
ATAC-seq
DNase-seq
pCHi-C
ChIP-seq
RRBS
tissue
retina
15
3
pigmented layer of retina
12
islet of Langerhans
1
4
primary cell
retinal pigment epithelial cell
1
2
1
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