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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
88
ATAC-seq
41
WGBS
37
single cell RNA-seq
total RNA-seq
22
snATAC-seq
Assay category
110
DNA accessibility
41
DNA methylation
37
Transcription
Date released
404
November, 2017
322
August, 2017
284
October, 2019
245
August, 2021
218
June, 2019
217
May, 2021
174
May, 2022
170
February, 2021
151
May, 2020
120
May, 2019
112
February, 2023
94
December, 2017
85
November, 2018
80
April, 2019
74
October, 2018
64
July, 2019
49
March, 2020
48
July, 2018
47
September, 2018
47
September, 2023
43
April, 2018
43
September, 2020
41
November, 2019
40
May, 2024
35
December, 2018
25
January, 2019
24
February, 2018
23
October, 2017
19
April, 2020
16
January, 2021
14
May, 2023
12
November, 2020
11
September, 2017
8
January, 2018
7
August, 2020
5
December, 2019
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
134
zippedFastqFolder
38
bed narrowPeak
20
bigWig
18
bam
18
fastq
1
bed bed3+
1
txt
Organism
188
Homo sapiens
Biosample type
134
primary cell
54
tissue
Organ
98
pancreas
80
epithelium
20
liver
14
kidney
2
musculature of body
Project
134
HPAP
54
AMP
Genome assembly (visualization)
39
hg19
11
GRCh38
Lab
134
Klaus Kaestner, Upenn
20
Karen Mohlke, UNC
18
Kyle Gaulton, UCSD
14
Katalin Susztak, Upenn
2
AMP-T2D consortium
Audit category:
1
audit script error
assay_title!
total RNA-seq
target.investigated_as!
other post-translational modification
BIOSAMPLE
ASSAY
188 results
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Clear Filters
ATAC-seq
WGBS
single cell RNA-seq
snATAC-seq
primary cell
Langerhans cell
33
21
pancreatic alpha cell
22
25
pancreatic beta cell
13
16
pancreatic acinar cell
4
tissue
liver
20
islet of Langerhans
18
kidney
11
3
skeletal muscle tissue
1
1
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