Toggle navigation
Home
About
Project overview
Policies
News
Contact
Data
Experiments
Annotations
Single Cell Embeddings
Statistical Models
Gene Perturbations
Data Standards & QC
Pipelines
Consortia
Publications
Tools
Single Cell Browser
Help
Getting started
Schema
Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
1552
ChIP-seq
1503
total RNA-seq
509
ATAC-seq
363
single cell RNA-seq
87
RNA microarray
84
snATAC-seq
75
WGBS
53
pCHi-C
29
Hi-C
21
RRBS
18
small RNA-seq
10
MeRIP-seq
5
GRO-seq
5
STARR-seq
4
Capture-C
4
FAIRE-seq
3
CRISPR genome editing followed by DNA sequencing
3
DNase-seq
3
snDrop-seq
2
HiChIP
1
CRISPR RNA-seq
1
CRISPR genome editing followed by sgRNA sequencing
1
CRISPRi RNA-seq
1
DNAme array
1
MPRA
1
shRNA RNA-seq
1
siRNA RNA-seq
whole genome sequencing assay
Assay category
3
DNA accessibility
Date released
3
August, 2017
October, 2019
Available data
201
bam
201
bed narrowPeak
201
bigBed narrowPeak
201
bigWig
199
bed broadPeak
bigBed broadPeak
197
bed bed3+
12
fastq
Organism
3
Homo sapiens
Biosample type
2
tissue
1
primary cell
Organ
1
liver
1
pancreas
Project
3
AMP
Genome assembly (visualization)
2
hg19
1
GRCh38
Lab
3
AMP-T2D consortium
assay_title!
whole genome sequencing assay
month_released!
October, 2019
files.file_type!
bigBed broadPeak
BIOSAMPLE
ASSAY
3 results
search-icon
table-tab-icon
Clear Filters
DNase-seq
tissue
islet of Langerhans
1
right lobe of liver
1
primary cell
skeletal muscle myoblast
1
Download