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Citing CMDGA
Experiment Matrix
Click or enter search terms to filter the experiments included in the matrix.
Assay
69
ChIP-seq
Assay category
69
DNA binding
Target of assay
42
transcription factor
21
histone
21
histone modification
16
control
11
narrow histone mark
broad histone mark
4
RNA binding protein
3
chromatin remodeller
Date released
713
February, 2021
356
November, 2017
341
May, 2020
321
May, 2021
305
August, 2021
275
August, 2017
251
October, 2019
201
February, 2023
199
May, 2022
168
July, 2018
104
July, 2019
79
November, 2018
69
December, 2017
64
March, 2020
62
May, 2019
59
September, 2020
57
October, 2018
56
September, 2018
55
November, 2019
49
April, 2018
47
September, 2023
43
April, 2019
35
December, 2018
31
February, 2018
26
January, 2019
25
February, 2020
23
June, 2019
20
May, 2024
19
April, 2020
16
January, 2021
15
May, 2023
15
November, 2020
13
October, 2017
10
December, 2019
9
September, 2017
8
January, 2018
7
August, 2020
5
March, 2019
5
March, 2023
4
August, 2018
4
October, 2022
3
June, 2018
1
August, 2022
Available data
79
bam
79
fastq
57
bed narrowPeak
57
bigWig
40
bigBed narrowPeak
bed bed3+
Organism
69
Homo sapiens
Biosample type
45
tissue
24
in vitro differentiated cells
Organ
53
liver
12
epithelium
10
embryo
Project
69
AMP
Genome assembly (visualization)
52
GRCh38
52
hg19
Lab
69
AMP-T2D consortium
Audit category:
27
inconsistent control
4
inconsistent ontology term
Audit category:
1
missing controlled_by
Audit category:
5
inconsistent control read length
assay_title!
whole genome sequencing assay
target.investigated_as!
broad histone mark
files.file_type!
bed bed3+
BIOSAMPLE
ASSAY
69 results
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Clear Filters
ChIP-seq
tissue
liver
38
right lobe of liver
7
in vitro differentiated cells
hepatocyte
8
pancreatic endoderm
6
Hepatic endoderm
4
Posterior foregut
2
definitive endodermal cell
2
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